List of software for processing multi-parametric MRI of the spinal cord (sorted by alphabetical order).

Name Purpose Reference
JIM 2D surface contour for segmentation Xinapse
JIST Groupwise multi-atlas segmentation Lucas et al. Neuroinformatics 2010
Spinal Cord Toolbox Collection of tools for segmentation, atlas-based analysis, etc. De Leener et al. Neuroimage 2017
spinalfmri8 Collection of tools for processing spinal cord fMRI data Stroman et al.
SpineSeg Spinal cord Segmentation Bergo et al. 2012
SpineSegmentation Spine Segmentation module for 3DSlicer  Jaume et al. 2010

If your software is not listed, please fork this repository and submit a pull request.